BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B08SP1|AL427118
(1011 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1127 1929 0.0
>3x_Contig1127
Length = 4949
Score = 1929 bits (970), Expect = 0.0
Identities = 993/1002 (99%), Gaps = 1/1002 (0%)
Strand = Plus / Plus
Query: 1 gatcaaagtgtaagattttggtcgaaaaggtatatgattcctgaaatatgcatgagtwtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 661 gatcaaagtgtaagattttggtcgaaaaggtatatgattcctgaaatatgcatgagtttc 720
Query: 61 caaagggcacgatggtttcattggaggatagggtcaaattgacatatatcatacgcctga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 caaagggcacgatggtttcattggaggatagggtcaaattgacatatatcatacgcctga 780
Query: 121 ragccttcataaagatggcatatggggtaggcaagtgaggttttgagaattctggggtga 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gagccttcataaagatggcatatggggtaggcaagtgaggttttgagaattctggggtga 840
Query: 181 agtgacccttccgctctggctggggtgactccgattcgttattcagctcaaggtttaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 agtgacccttccgctctggctggggtgactccgattcgttattcagctcaaggtttaact 900
Query: 241 ctggtaatggatcatcgttaatactaaaacaccataactccctggaaaaaagagctgcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ctggtaatggatcatcgttaatactaaaacaccataactccctggaaaaaagagctgcaa 960
Query: 301 gtactttggggtttttcctccttaggaacaactctgcttgaattgaccattgattatctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtactttggggtttttcctccttaggaacaactctgcttgaattgaccattgattatctg 1020
Query: 361 ccttgctaggtacatattggtgatagtttatttgtttgacagtttctaacctgtataaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 ccttgctaggtacatattggtgatagtttatttgtttgacagtttctaacctgtataaat 1080
Query: 421 tggtaacgatgtcctccaatcgacatgcgtccccaacctcctttttcatggtttccgttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 tggtaacgatgtcctccaatcgacatgcgtccccaacctcctttttcatggtttccgttg 1140
Query: 481 ctctgatgaaaagtaagctggatagtcagactgattaggatgcaacggtacttcaaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1141 ctctgatgaaaagtaagctggatagtcagactgattaggatgcaacggtacttcaaaaat 1200
Query: 541 ccgtacttgttaagagatgctgtctagttaccttcttttaaaattatacgattttatctc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 ccgtacttgttaagagatgctgtctagttaccttcttttaaaattatacgattttatctc 1260
Query: 601 gagttatcactacttataataatgaatcgcttgatcattataaaacaaaaacaaaaaaga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1261 gagttatcactacttataataatgaatcgcttgatcattataaaacaaaaacaaaaaaga 1320
Query: 661 ttgccaatacaaaacaatgaatgacaggtaccaaagcataaagctaaacgcaccccccgt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1321 ttgccaatacaaaacaatgaatgacaggtaccaaagcataaagctaaacgcaccccccgt 1380
Query: 721 gattagcggcgcactctcaattggaaacgcakaataacctgtacttctgctaacagtggt 780
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1381 gattagcggcgcactctcaattggaaacgcagtataacctgtacttctgctaacagtggt 1440
Query: 781 tggcgtatgcaagwatggcaataaaactgactgaagagaacgacactgagtcatcagata 840
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1441 tggcgtatgccaagatggcaataaaactgactgaagagaacgacactgagtcatcagata 1500
Query: 841 gtggtattctgcttttaagggaaacagggtcacttggtatcggggatgtcaatcgctata 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1501 gtggtattctgcttttaagggaaacagggtcacttggtatcggggatgtcaatcgctata 1560
Query: 901 agataattgtagataaaaataagctactatctgacggaattgagtgtactgacgatactc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1561 agataattgtagataaaaataagctactatctgacggaattgagtgtactgacgatactc 1620
Query: 961 tctatctcgaattc-aaaaccaggagagcgcgcttdtgaggc 1001
|||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 1621 tctatctcgaattcaaaaaccaggagagcgcgcttttgaggc 1662
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6470
Number of Sequences: 1807
Number of extensions: 6470
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 1011
length of database: 10,358,551
effective HSP length: 16
effective length of query: 995
effective length of database: 10,329,639
effective search space: 10277990805
effective search space used: 10277990805
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)